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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smek1, SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Sequence ID:NM_001160214
NM_211355
Entrez Gene ID:68734
Ensembl ID:ENSMUSG00000041846

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 101040043 - 101040280

 Exon Info From UCSC:
NM_001160214
NM_211355

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6825400Full LengthBC064465SMEK homolog 1, suppressor of mek1 (Dictyostelium)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997594  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001160214 NP_001153686    
NM_211355 NP_997594 Q6P2K6 DUF625

Related Sequences

 
mRNAGenPeptSwissProt
BC044817 AAH44817 Q6P2K6
BC064465 AAH64465 Q6P2K6
AK031629 BAC27486 Q8C0D8
AK051239 BAC34569 Q6P2K6
AK173331 BAD32609 Q6P2K6
AK148868 BAE28682 Q6P2K6
AK156272 BAE33651 Q6P2K6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smek1 NP_001153686 H.sapiens SMEK1 55671 Gene Info NP_115949 99
A.gambiae AgaP_AGAP003402 1272779   XP_311690 64
D.melanogaster flfl 41675   NP_731849 59
C.elegans smk-1 179243   NP_001023909 41
A.thaliana AT3G06670 819852   NP_001189831 36
S.pombe SPBC216.01c 2540726   NP_595353 34
S.cerevisiae PSY2 855520   NP_014198 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)