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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Jrk, Jerky
Sequence ID:NM_008415
Entrez Gene ID:16469
Ensembl ID:ENSMUSG00000046380

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 D3|15 42.8

Chromosomal Position (from UCSC)

Chromosomal Position:15: 74702411 - 74709297

NM_008415 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
133027453499274538293
330333787453967674539751

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066310Full LengthBC166010jerky
4009864IncompleteBC014281jerky

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032441  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008415 NP_032441 Q60976
Q8C995
DDE
CENP-B_N

Related Sequences

 
mRNAGenPeptSwissProt
U35730 AAC39941 Q60976
Q543Z9
BC166010 AAI66010  
AK042652 BAC31321 Q8C995
AK043134 BAC31470 Q60976
Q543Z9
AK168885 BAE40702 Q60976
Q543Z9
AK171809 BAE42675 Q3TAJ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Jrk NP_032441 R.norvegicus Jrk 315073   NP_001098082 94
H.sapiens JRK 8629 Gene Info NP_003715 78
N.crassa NCU00996 3880055   XP_963906 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)