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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccnt1, cyclin T1
Sequence ID:NM_009833
Entrez Gene ID:12455
Ensembl ID:ENSMUSG00000011960

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 F2

Chromosomal Position (from UCSC)

Chromosomal Position:15: 98543210 - 98567636

NM_009833 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113989837364198375038
139914699837695498377024
147016339837717598377338
163416799837909698379141
168017429838234498382406
174318039838503198385091
180419329839062798390755
193320149839547798395558
201521759839790698398066

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40111509Full LengthBC131685cyclin T1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033963  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009833 NP_033963 Q9QWV9 Cyclin_N

Related Sequences

 
mRNAGenPeptSwissProt
AF095640 AAD13656 Q9QWV9
AF113951 AAD17205 Q9QWV9
AF087662 AAD17798 Q9QWV9
AF109179 AAD19654 Q9QWV9
BC131685 AAI31686 Q9QWV9
AK133168 BAE21540 Q9QWV9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccnt1 NP_033963 R.norvegicus Ccnt1 315291   NP_001101580 97
H.sapiens CCNT1 904 Gene Info NP_001231 90
A.gambiae AgaP_AGAP006678 1277267   XP_316716 55
D.melanogaster CycT 39961   NP_524127 42
A.thaliana AT5G45190 834555   NP_199332 38
A.thaliana CYCT1;4 827702   NP_193695 31
C.elegans cit-1.2 176126   NP_498745 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)