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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pgap3, post-GPI attachment to proteins 3
Sequence ID:NM_001033537
Entrez Gene ID:320655
Ensembl ID:ENSMUSG00000038208

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 98388679 - 98400405

NM_001033537 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
114309824998598251414
143116359825160098251804
163617729825199098252126
177318349825239398252454
183518979825300898253070
189820509825920998259361
205121489826019898260295
214924249826152898261803

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015872Full LengthBC148841per1-like domain containing 1
4225070IncompleteBC035945per1-like domain containing 1
5371387IncompleteBC030368per1-like domain containing 1
100015238BC146356per1-like domain containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033537 NP_001028709 A2A559  

Related Sequences

 
mRNAGenPeptSwissProt
BC030368 AAH30368 Q8K2Q4
BC146356 AAI46357  
BC148841 AAI48842  
AK170817 BAE42049 A2A559

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pgap3 NP_001028709 H.sapiens PGAP3 93210 Gene Info NP_219487 85
D.melanogaster CG3271 35570   NP_610223 41
A.gambiae AgaP_AGAP005392 1276093   XP_315401 40
N.crassa NCU08609 3880966   XP_964817 40
S.pombe SPAC823.07 2543664   NP_593834 39
A.thaliana AT1G16560 838226   NP_973842 37
S.cerevisiae PER1 850411   NP_009973 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)