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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
Sequence ID:NM_172689
Entrez Gene ID:230073
Ensembl ID:ENSMUSG00000040296

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A5|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 40203776 - 40220600

 Exon Info From UCSC:
NM_172689

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068109Full LengthBC167209DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
4947395IncompleteBC106095DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
4950144IncompleteBC027369DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
40095873IncompleteBC152540DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
40095880IncompleteBC127163DEAD (Asp-Glu-Ala-Asp) box polypeptide 58

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766277  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_172689 NP_766277 Q6Q899 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC027369 AAH27369 Q05CC6  
BC106095 AAI06096 Q3KQQ7  
BC127163 AAI27164 A1L0V6  
BC152540 AAI52541 A7YY79  
BC167209 AAI67209    
AY553221 AAS59532 Q6Q899 EC 3.6.4.13
AK049305 BAC33670 Q6Q899 EC 3.6.4.13
AK052871 BAC35183 Q8C6Y8  
AK078287 BAC37205 Q6Q899 EC 3.6.4.13
AK087261 BAC39830 Q6Q899 EC 3.6.4.13
AK155930 BAE33508 Q3U1I9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ddx58 NP_766277 H.sapiens DDX58 23586 Gene Info NP_055129 77
C.elegans drh-1 177425   NP_501018 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)