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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Als2cl, ALS2 C-terminal like
Sequence ID:NM_001146059
NM_001146060
NM_146228
Entrez Gene ID:235633
Ensembl ID:ENSMUSG00000044037

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F3|9 64.01 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 110880173 - 110900524

 Exon Info From UCSC:
NM_001146059
NM_001146060
NM_146228

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40097635Full LengthBC117928ALS2 C-terminal like
40097636Full LengthBC117929ALS2 C-terminal like
4216135IncompleteBC022645ALS2 C-terminal like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666340  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146059 NP_001139531    
NM_001146060 NP_001139532    
NM_146228 NP_666340 Q60I26 VPS9
MORN

Related Sequences

 
mRNAGenPeptSwissProt
BC022645 AAH22645 Q60I26
BC117928 AAI17929 Q60I26
BC117929 AAI17930 Q60I26
AF481142 AAM89221 Q60I26
AK030815 BAC27145 Q60I26
AK053076 BAC35257 Q60I26
AK131149 BAD21399 Q60I26
AB107016 BAD51818 Q60I26
AK155451 BAE33270 Q60I26

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Als2cl NP_001139531 R.norvegicus Als2cl 316017   XP_002730023 94
H.sapiens ALS2CL 259173 Gene Info NP_001177636 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)