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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tfap2a, transcription factor AP-2, alpha
Sequence ID:NM_001122948
NM_011547
Entrez Gene ID:21418
Ensembl ID:ENSMUSG00000021359

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A5-B1|13 25.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 40717113 - 40733714

 Exon Info From UCSC:
NM_001122948
NM_011547

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3497082Full LengthBC007471transcription factor AP-2, alpha
3983850Full LengthBC018226transcription factor AP-2, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035677  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001122948 NP_001116420    
NM_011547 NP_035677   TF_AP-2

Related Sequences

 
mRNAGenPeptSwissProt
U17285 AAA85681 P34056
U17286 AAA85682 P34056
U17287 AAA85683 P34056
U17288 AAA85684 P34056
BC007471 AAH07471 P34056
BC018226 AAH18226 P34056
AK013900 BAB29047 P34056
AK053704 BAC35484 Q8BPN4
AK145772 BAE26642 Q3UL09
X57012 CAA40331 P34056
X74216 CAA52292 P34056

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tfap2a NP_035677 R.norvegicus Tfap2a 306862   NP_001100815 100
H.sapiens TFAP2A 7020 Gene Info NP_003211 99
A.gambiae AgaP_AGAP011625 1281006   XP_320880 59
D.melanogaster AP-2 40398   NP_730664 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)