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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr1i2, nuclear receptor subfamily 1, group I, member 2
Sequence ID:NM_001098404
NM_010936
Entrez Gene ID:18171
Ensembl ID:ENSMUSG00000022809

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 38249010 - 38294604

 Exon Info From UCSC:
NM_001098404
NM_010936

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860799Full LengthBC137780nuclear receptor subfamily 1, group I, member 2
40129719Full LengthBC120796nuclear receptor subfamily 1, group I, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035066  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098404 NP_001091874    
NM_010936 NP_035066 O54915 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
AF031814 AAC39964 O54915
BC120796 AAI20797 Q0P525
BC137780 AAI37781 Q0P525
AK011108 BAB27404 Q9CRZ0
AK018630 BAB31316 O54915

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr1i2 NP_035066 R.norvegicus Nr1i2 84385   NP_443212 97
H.sapiens NR1I2 8856 Gene Info NP_071285 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta