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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ap1s1, adaptor protein complex AP-1, sigma 1
Sequence ID:NM_007457
Entrez Gene ID:11769
Ensembl ID:ENSMUSG00000004849

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 G1

Chromosomal Position (from UCSC)

Chromosomal Position:5: 137034998 - 137046037

NM_007457 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1798137510863137511660
799936137513287137513424
9371045137517638137517746
10461224137518933137519111
12251277137521877137521929

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5714625Full LengthBC052692adaptor protein complex AP-1, sigma 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031483  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007457 NP_031483 P61967 Clat_adaptor_s

Related Sequences

 
mRNAGenPeptSwissProt
M62418 AAA37243 P61967
BC052692 AAH52692 P61967
AK002225 BAB21947 P61967

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ap1s1 NP_031483 H.sapiens AP1S1 1174 Gene Info NP_001274 100
R.norvegicus Ap1s1 360785   NP_001101801 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)