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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Timp1, tissue inhibitor of metalloproteinase 1
Sequence ID:NM_001044384
NM_011593
Entrez Gene ID:21857
Ensembl ID:ENSMUSG00000001131

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1.3|X 6.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 20873144 - 20874614

 Exon Info From UCSC:
NM_001044384
NM_011593

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3158222Full LengthBC008107tissue inhibitor of metalloproteinase 1
3158222Full LengthBC034260tissue inhibitor of metalloproteinase 1
30056565Full LengthBC051260tissue inhibitor of metalloproteinase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035723  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001044384 NP_001037849 P12032  
NM_011593 NP_035723   TIMP

Related Sequences

 
mRNAGenPeptSwissProt
M17243 AAA40471 P12032
BC008107 AAH08107 P12032
BC034260 AAH34260 P12032
BC051260 AAH51260 P12032
AY622853 AAT46408 Q6GXA9
V00755 CAA24132 P12032
X04684 CAA28386  
X04684 CAA28387 P12032

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Timp1 NP_001037849 R.norvegicus Timp1 116510   NP_446271 87
H.sapiens TIMP1 7076 Gene Info NP_003245 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta