Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
Sequence ID:NM_173731
Entrez Gene ID:208982
Ensembl ID:ENSMUSG00000007908

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 D|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 76015014 - 76134895

NM_173731 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12067586278375862988
2072877590397775904057
2883957590425875904365
3964917592043375920528
4926407592247475922622
6417047592919775929260
7058937593210975932297
89410197597811875978243
102036157598156175984156

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5368383Full LengthBC0373813-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_776092  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_173731 NP_776092 Q8JZS7 EC 4.1.3.4 HMGL-like

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC037381 AAH37381 Q8JZS7 EC 4.1.3.4
AK141622 BAE24772 Q8JZS7 EC 4.1.3.4
AK164164 BAE37658 Q3TPS7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hmgcll1 NP_776092 R.norvegicus Hmgcll1 367112   XP_345954 95
H.sapiens HMGCLL1 54511 Gene Info NP_061909 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)