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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Fgd1, FYVE, RhoGEF and PH domain containing 1
Sequence ID:NM_008001
Entrez Gene ID:14163
Ensembl ID:ENSMUSG00000025265

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X F3|X 64.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 151047169 - 151089084

 Exon Info From UCSC:
NM_008001

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3674293Full LengthBC011462FYVE, RhoGEF and PH domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032027  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008001 NP_032027 P52734 PH
RhoGEF
FYVE

Related Sequences

 
mRNAGenPeptSwissProt
U22325 AAA96001 P52734
BC004838 AAH04838 Q99K79
BC011462 AAH11462 P52734
AK148151 BAE28377 Q3UG32
AK162865 BAE37091 Q3TRD9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fgd1 NP_032027 R.norvegicus Fgd1 363460   NP_001032635 100
H.sapiens FGD1 2245 Gene Info NP_004454 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)