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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Crocc, ciliary rootlet coiled-coil, rootletin
Sequence ID:NM_001145958
NM_172122
Entrez Gene ID:230872
Ensembl ID:ENSMUSG00000040860

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 141016641 - 141053661

 Exon Info From UCSC:
NM_001145958
NM_172122

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6394697Full LengthBC054054ciliary rootlet coiled-coil, rootletin
4481964IncompleteBC038074ciliary rootlet coiled-coil, rootletin
4501113IncompleteBC034536ciliary rootlet coiled-coil, rootletin
5361367IncompleteBC027090ciliary rootlet coiled-coil, rootletin
5366347IncompleteBC036729ciliary rootlet coiled-coil, rootletin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145958 NP_001139430    
NM_172122 NP_742120 Q8CJ40  

Related Sequences

 
mRNAGenPeptSwissProt
BC027090 AAH27090 Q8CJ40
BC054054 AAH54054 Q8CJ40
AF527975 AAN73044 Q8CJ40
AK122285 BAC65567 Q8CJ40

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Crocc NP_742120 R.norvegicus Crocc 313663   NP_001101460 93
H.sapiens CROCC 9696 Gene Info NP_055490 83
A.gambiae AgaP_AGAP003449 1272821   XP_311738 32
D.melanogaster CG6129 42860   NP_651216 29
C.elegans dyf-14 173801   NP_494820 24
C.elegans lfi-1 180771   NP_508848 24

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)