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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lig4, ligase IV, DNA, ATP-dependent
Sequence ID:NM_176953
Entrez Gene ID:319583
Ensembl ID:ENSMUSG00000049717

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A1.1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 9970876 - 9977686

NM_176953 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1378899700199973806
3789408199760309976322

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014700BC141417ligase IV, DNA, ATP-dependent

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_795927  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_176953 NP_795927 Q8BTF7 EC 6.5.1.1 BRCT
DNA_ligase_A_M
DNA_ligase_A_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC141417 AAI41418 Q8BTF7 EC 6.5.1.1
AK030029 BAC26747 Q8BTF7 EC 6.5.1.1
AK083353 BAC38882 Q8BTF5  
AK148081 BAE28333 Q8BTF7 EC 6.5.1.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lig4 NP_795927 R.norvegicus Lig4 290907   NP_001099565 94
H.sapiens LIG4 3981 Gene Info NP_001091738 87
D.melanogaster Lig4 32322   NP_572907 35
A.thaliana ATLIG4 835822   NP_568851 34
N.crassa NCU06264 3879007   XP_962868 34
A.gambiae AgaP_AGAP000623 1271687   XP_310455 32
S.pombe lig4 2539042   NP_587888 31
S.cerevisiae DNL4 854166   NP_014647 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)