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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tacr1, tachykinin receptor 1
Sequence ID:NM_009313
Entrez Gene ID:21336
Ensembl ID:ENSMUSG00000030043

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 D1

Chromosomal Position (from UCSC)

Chromosomal Position:6: 82403037 - 82560101

NM_009313 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11088235246882352575
10913058235279582353991
130615008244251982442713
150116518250288082503030
165218488250485382505049
184950258250692082510096

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30536972Full LengthBC075631tachykinin receptor 1
30618488Full LengthBC098332tachykinin receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033339  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009313 NP_033339 P30548 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
L27826 AAA17891 P30548
L27828 AAA17892 P30548
BC075631 AAH75631 P30548
BC098332 AAH98332 P30548
AK038558 BAC30042 P30548
AK048680 BAE43336 Q3V353
X62934 CAA44707 P30548

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tacr1 NP_033339 R.norvegicus Tacr1 24807   NP_036799 99
H.sapiens TACR1 6869 Gene Info NP_001049 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)