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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tacr2, Tachykinin receptor 2
Sequence ID:NM_009314
Entrez Gene ID:21337
Ensembl ID:ENSMUSG00000020081

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B4|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 62252755 - 62265990

NM_009314 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17726171518561715956
7739676172090561721099
96811216172391961724072
112213186172423161724427
131922586172779861728737

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40039032Full LengthBC106959tachykinin receptor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033340  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009314 NP_033340 Q8BZV9
P30549
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC106959 AAI06960 Q3KP20
P30549
AK033443 BAC28290 Q8BZV9
X62933 CAA44706 P30549

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tacr2 NP_033340 H.sapiens TACR2 6865 Gene Info NP_001048 86
A.gambiae GPRTAK1 1273136   XP_312088 41
D.melanogaster Takr86C 41286   NP_524304 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)