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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Areg, amphiregulin
Sequence ID:NM_009704
Entrez Gene ID:11839
Ensembl ID:ENSMUSG00000029378

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 91139598 - 91148423

NM_009704 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12609156864091568899
2614889156992391570150
4896909157251491572715
6918529157335991573520
8539619157566391575771
96211999157722091577457

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3597695Full LengthBC009138amphiregulin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033834  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009704 NP_033834 Q4FJT2
P31955
EGF

Related Sequences

 
mRNAGenPeptSwissProt
BC009138 AAH09138 Q4FJT2
P31955
D12648 BAA02169 Q4FJT2
P31955
AK018590 BAB31296 Q4FJT2
P31955
CT010320 CAJ18528 Q4FJT2
P31955

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Areg NP_033834 R.norvegicus Areg 29183   NP_058819 84
H.sapiens AREGB 727738 Gene Info XP_001125684 72
H.sapiens AREG 374 Gene Info NP_001648 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)