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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mc5r, melanocortin 5 receptor
Sequence ID:NM_013596
Entrez Gene ID:17203
Ensembl ID:ENSMUSG00000007480

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E2|18 42.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 68337605 - 68339711

NM_013596 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11236849725668497378
12411626849832668499364

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40045167Full LengthBC100723melanocortin 5 receptor
40045170Full LengthBC100722melanocortin 5 receptor
40045171Full LengthBC100721melanocortin 5 receptor
40045173Full LengthBC100720melanocortin 5 receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038624  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013596 NP_038624   7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U08354 AAA76585 P41149
BC100720 AAI00721 Q496T0
BC100721 AAI00722 Q496T0
BC100722 AAI00723 Q496T0
BC100723 AAI00724 Q496T0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mc5r NP_038624 R.norvegicus Mc5r 25726   NP_037314 94
H.sapiens MC5R 4161 Gene Info NP_005904 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)