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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Plod2, procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
Sequence ID:NM_001142916
NM_011961
Entrez Gene ID:26432
Ensembl ID:ENSMUSG00000032374

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 E3.3|9 52.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 92542451 - 92608424

 Exon Info From UCSC:
NM_001142916
NM_011961

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5007509Full LengthBC021352procollagen lysine, 2-oxoglutarate 5-dioxygenase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036091  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001142916 NP_001136388      
NM_011961 NP_036091 Q9R0B9 EC 1.14.11.4 2OG-FeII_Oxy

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF080572 AAD53987 Q9R0B9 EC 1.14.11.4
BC021352 AAH21352 Q9R0B9 EC 1.14.11.4
AK157207 BAE34000 Q3U055  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Plod2 NP_001136388 R.norvegicus Plod2 300901   NP_787065 97
H.sapiens PLOD2 5352 Gene Info NP_891988 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)