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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cnr1, cannabinoid receptor 1 (brain)
Sequence ID:NM_007726
Entrez Gene ID:12801
Ensembl ID:ENSMUSG00000044288

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A5|4 13.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 33943613 - 33945035

NM_007726 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15273401160634012132
52858073403052634035805

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30536039Full LengthBC079564cannabinoid receptor 1 (brain)
30619104Full LengthBC070447cannabinoid receptor 1 (brain)
30621599IncompleteBC075644cannabinoid receptor 1 (brain)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031752  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007726 NP_031752 P47746 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U17985 AAA57202 P47746
U40709 AAA91176 P47746
AF153345 AAD34624 P47746
BC070447 AAH70447 P47746
BC079564 AAH79564 P47746
AY522554 AAS91800 P47746
AK139417 BAE24003 P47746

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cnr1 NP_031752 R.norvegicus Cnr1 25248   NP_036916 100
H.sapiens CNR1 1268 Gene Info NP_001153698 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta