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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Csf1, Colony stimulating factor 1 (macrophage)
Sequence ID:NM_007778
NM_001113529
NM_001113530
Entrez Gene ID:12977
Ensembl ID:ENSMUSG00000014599

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F3|3 51.0

Chromosomal Position (from UCSC)

Chromosomal Position:3: 107747732 - 107760242

 Exon Info From UCSC:
NM_007778
NM_001113529
NM_001113530

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30100524Full LengthBC066200colony stimulating factor 1 (macrophage)
30100601Full LengthBC066205colony stimulating factor 1 (macrophage)
30106218Full LengthBC066187colony stimulating factor 1 (macrophage)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031804  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113529 NP_001107001    
NM_001113530 NP_001107002    
NM_007778 NP_031804 P07141
Q3U4F9
CSF-1

Related Sequences

 
mRNAGenPeptSwissProt
M15692 AAA37480 P07141
M21952 AAA37481 P07141
M21149 AAA37482 P07141
S78392 AAB34634  
BC025593 AAH25593 P07141
BC066187 AAH66187 P07141
BC066200 AAH66200 P07141
BC066205 AAH66205 P07141
AK138489 BAE23681 P07141
AK154261 BAE32472 Q3U4F9
AK154872 BAE32893 P07141
AK160995 BAE36140 P07141
AK166370 BAE38736 Q3TLQ6
AK170154 BAE41601 Q3TDK0
X05010 CAA28660 P07141

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Csf1 NP_001107002 R.norvegicus Csf1 78965   NP_076471 86
H.sapiens CSF1 1435 Gene Info NP_757351 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta