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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pin1, protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
Sequence ID:NM_023371
Entrez Gene ID:23988
Ensembl ID:ENSMUSG00000032171

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A3|9 4.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 20652104 - 20663690

NM_023371 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1682045657320456640
692872045980520460023
2883982046674120466851
39938082046761820471027

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4971446Full LengthBC038254protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075860  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_023371 NP_075860 Q9QUR7 EC 5.2.1.8 WW
Rotamase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC038254 AAH38254 Q9QUR7 EC 5.2.1.8
AB009691 BAA87037 Q9QUR7 EC 5.2.1.8
AK002665 BAB22270 Q9QUR7 EC 5.2.1.8
AK003369 BAB22743 Q9QUR7 EC 5.2.1.8
AK054045 BAC35631 Q9QUR7 EC 5.2.1.8
AK139395 BAE23993 Q3UTI7  
AK150652 BAE29739 Q9QUR7 EC 5.2.1.8
AK160228 BAE35702 Q9QUR7 EC 5.2.1.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pin1 NP_075860 R.norvegicus Pin1 298696   NP_001100171 98
H.sapiens PIN1 5300 Gene Info NP_006212 96
C.elegans Y110A2AL.13 190941   NP_494393 60
A.gambiae AgaP_AGAP004321 1274464   XP_313593 58
D.melanogaster dod 33111   NP_523428 56
N.crassa NCU08554 3879175   XP_963036 56
A.thaliana PIN1AT 816316   NP_179395 52
S.pombe pin1 2539218   NP_587913 52
S.cerevisiae ESS1 853475   NP_012551 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta