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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gpc2, glypican 2 (cerebroglycan)
Sequence ID:NM_172412
Entrez Gene ID:71951
Ensembl ID:ENSMUSG00000029510

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 138273659 - 138279965

NM_172412 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1910138714887138715796
9111080138716682138716851
10811220138716934138717073
12211367138717156138717302
13681498138717435138717565
14991661138717811138717973
16621742138718634138718714
17432065138719442138719764
20662224138720066138720224
22252513138720876138721164

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5707617Full LengthBC083180glypican 2 (cerebroglycan)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766000  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172412 NP_766000 Q8BKV1 Glypican

Related Sequences

 
mRNAGenPeptSwissProt
BC083180 AAH83180 Q8BKV1
BC128572 AAI28573 A1A5C0
AK049639 BAC33852 Q8BKV1
AK160959 BAE36115 Q3TU56

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gpc2 NP_766000 R.norvegicus Gpc2 171517   NP_612520 97
H.sapiens GPC2 221914 Gene Info NP_689955 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)