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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Col6a3, collagen, type VI, alpha 3
Sequence ID:NM_009935
NM_001243008
NM_001243009
Entrez Gene ID:12835
Ensembl ID:ENSMUSG00000048126

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 D|1 53.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 90802472 - 90843928


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3486796IncompleteBC005491collagen, type VI, alpha 3
4483085IncompleteBC080662collagen, type VI, alpha 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243008 NP_001229937    
NM_001243009 NP_001229938    

Related Sequences

 
mRNAGenPeptSwissProt
AF064749 AAC23667 O88493
AF064750 AAC23668 O88494
AF034136 AAD01978 Q9Z0I9
BC005491 AAH05491 Q99K31
BC049881 AAH49881 Q80VJ0
BC080662 AAH80662 Q66K11
Z18279 CAA79156 Q05504

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Col6a3 XP_003085374 R.norvegicus Col6a3 367313   NP_001102478 94
H.sapiens COL6A3 1293 Gene Info NP_004360 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)