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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cartpt, CART prepropeptide
Sequence ID:NM_001081493
NM_013732
Entrez Gene ID:27220
Ensembl ID:ENSMUSG00000021647

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13|13 D1

Chromosomal Position (from UCSC)

Chromosomal Position:13: 99898488 - 99900657

 Exon Info From UCSC:
NM_001081493
NM_013732

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6817832Full LengthBC056431CART prepropeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038760  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001081493 NP_001074962    
NM_013732 NP_038760 P56388 CART

Related Sequences

 
mRNAGenPeptSwissProt
BC056431 AAH56431 P56388
AK134656 BAE22228 Q3UYI4
AK135007 BAE22382 Q3UY31

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cartpt NP_038760 R.norvegicus Cartpt 29131   NP_058806 98
H.sapiens CARTPT 9607 Gene Info NP_004282 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)