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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dag1, dystroglycan 1
Sequence ID:NM_010017
Entrez Gene ID:13138
Ensembl ID:ENSMUSG00000039952

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F2|9 60.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 108205957 - 108263924

NM_010017 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13704108108288108111991
37054102108120343108120740
41034159108155431108155487
41604415108165811108166066

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3496914Full LengthBC007150dystroglycan 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034147  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010017 NP_034147 Q544G5
Q62165
DAG1

Related Sequences

 
mRNAGenPeptSwissProt
U43512 AAC52853 Q62165
BC007150 AAH07150 Q544G5
Q62165
AK036174 BAC29332 Q8CBE6
AK038702 BAC30105 Q544G5
Q62165
AK053886 BAC35576 Q8BPJ7
X86073 CAA60031 Q62165
Z34532 CAA84293 Q62165

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dag1 NP_034147 R.norvegicus Dag1 114489   XP_343484 98
H.sapiens DAG1 1605 Gene Info NP_004384 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta