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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc10a6, solute carrier family 10 (sodium/bile acid cotransporter family), member 6
Sequence ID:NM_029415
Entrez Gene ID:75750
Ensembl ID:ENSMUSG00000029321

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E5|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 103606541 - 103629232

NM_029415 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11037104034729104035765
10381195104037999104038156
11961368104041388104041560
13691457104046649104046737
14581576104047374104047492
15772124104057874104058421

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862365Full LengthBC139343solute carrier family 10 (sodium/bile acid cotransporter family), member 6
8862368Full LengthBC139346solute carrier family 10 (sodium/bile acid cotransporter family), member 6
40058121Full LengthBC127608solute carrier family 10 (sodium/bile acid cotransporter family), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083691  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029415 NP_083691 Q9CXB2 SBF

Related Sequences

 
mRNAGenPeptSwissProt
BC127608 AAI27609 Q9CXB2
BC139343 AAI39344 Q9CXB2
BC139346 AAI39347 Q9CXB2
AK018423 BAB31203 Q9CXB2
AJ583504 CAE47479 Q9CXB2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc10a6 NP_083691 R.norvegicus Slc10a6 289459   NP_932166 91
H.sapiens SLC10A6 345274 Gene Info NP_932069 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)