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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chmp1b, charged multivesicular body protein 1B
Sequence ID:NM_024190
Entrez Gene ID:67064

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 67205410 - 67207880

NM_024190 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125296736501267367540

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3491354Full LengthBC002229chromatin modifying protein 1B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077152  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024190 NP_077152 Q99LU0 ESCRT-III

Related Sequences

 
mRNAGenPeptSwissProt
BC002229 AAH02229 Q99LU0
AK014091 BAB29150 Q99LU0
AK151071 BAE30087 Q99LU0
AK167614 BAE39667 Q3TJ28
CT010307 CAJ18515 Q99LU0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chmp1b NP_077152 H.sapiens CHMP1B 57132 Gene Info NP_065145 98
R.norvegicus Chmp1b 689364   NP_001103003 98
A.thaliana VPS46.2 843634   NP_565053 48
A.thaliana VPS46.1 838349   NP_173215 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)