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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sh3gl3, SH3-domain GRB2-like 3
Sequence ID:NM_017400
Entrez Gene ID:20408
Ensembl ID:ENSMUSG00000030638

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 D2-3|7 41.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 82260128 - 82307413

NM_017400 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11788931972789319904
1792478940864189408709
2483208941678989416861
3214648941928289419425
4655988942237089422503
5997578942463689424794
7588618943256489432667
8629718943353089433639
97215978945529989455924

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5254139Full LengthBC027096SH3-domain GRB2-like 3
6770826Full LengthBC100453SH3-domain GRB2-like 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059096  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017400 NP_059096 Q62421 SH3_1
BAR

Related Sequences

 
mRNAGenPeptSwissProt
U58887 AAC72268 Q62421
BC027096 AAH27096 Q62421
BC100453 AAI00454 Q497N4
AK012114 BAB28042 Q9CZV7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sh3gl3 NP_059096 R.norvegicus Sh3gl3 81921   NP_112517 95
H.sapiens SH3GL3 6457 Gene Info NP_003018 87
A.gambiae AgaP_AGAP004766 1278459   XP_318050 57
D.melanogaster endoA 42265   NP_732383 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)