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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cldn4, claudin 4
Sequence ID:NM_009903
Entrez Gene ID:12740
Ensembl ID:ENSMUSG00000047501

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 75.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 134945126 - 134946906

NM_009903 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
161827135420992135422803

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130653Full LengthBC132376claudin 4
40130655Full LengthBC132378claudin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034033  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009903 NP_034033 O35054
Q3UM35
PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
AF087822 AAD09757 O35054
Q3UM35
BC132376 AAI32377 Q3UM35
BC132378 AAI32379 Q3UM35
AB000713 BAA22985 O35054
Q3UM35
AK145152 BAE26263 O35054
Q3UM35

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cldn4 NP_034033 R.norvegicus Cldn4 304407   NP_001012022 96
H.sapiens CLDN4 1364 Gene Info NP_001296 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)