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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smad3, SMAD family member 3
Sequence ID:NM_016769
Entrez Gene ID:17127
Ensembl ID:ENSMUSG00000032402

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 D|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 63650151 - 63757703

NM_016769 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
136196349457363498191
362037646350028763500431
376539026350249263502629
390341156350335763503569
411641666351147163511521
416742416351395463514028
424243736351528163515412
437445676351553563515728
456850906360527863605800

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30432720Full LengthBC066850MAD homolog 3 (Drosophila)
5150839IncompleteBC022904MAD homolog 3 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058049  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016769 NP_058049   MH1
MH2

Related Sequences

 
mRNAGenPeptSwissProt
AF016189 AAB81755 Q8BUN5
BC022904 AAH22904 Q05CN3
BC066850 AAH66850 Q8BUN5
AB008192 BAA76956 Q8BUN5
AK048626 BAC33398 Q8BUN5
AK083158 BAC38789 Q8BUN5
AK041743 BAE20601 Q3V3E0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smad3 NP_058049 H.sapiens SMAD3 4088 Gene Info NP_005893 100
R.norvegicus Smad3 25631   NP_037227 100
D.melanogaster Smox 31738   NP_511079 71
A.gambiae AgaP_AGAP009777 1279189   XP_318870 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta