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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ctbp1, C-terminal binding protein 1
Sequence ID:NM_001198859
NM_001198860
NM_001198861
NM_013502
Entrez Gene ID:13016
Ensembl ID:ENSMUSG00000037373

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B1|5 19.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 33247722 - 33274969

Transcript StartTranscript EndChromosomal Start Chromosomal End
19643359037133591334
96510823359175533591872
108312103359223533592362
121113413359301933593149
134215563359350633593720
155717633360178633601992
176419083360365733603801
190920633360953133609685
206422543361742733617617

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3155102Full LengthBC013702C-terminal binding protein 1
4192052Full LengthBC015071C-terminal binding protein 1
5005681Full LengthBC042425C-terminal binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038530  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198859 NP_001185788    
NM_001198860 NP_001185789    
NM_001198861 NP_001185790    
NM_013502 NP_038530 O88712 2-Hacid_dh
2-Hacid_dh_C

Related Sequences

 
mRNAGenPeptSwissProt
BC013702 AAH13702 O88712
BC015071 AAH15071 O88712
BC042425 AAH42425 O88712
AB033122 BAA85180 O88712
AK133816 BAE21859 O88712
AK160658 BAE35946 O88712
AK165276 BAE38115 O88712
AK170133 BAE41586 O88712
AK171650 BAE42587 O88712
AJ010483 CAA09219 O88712

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ctbp1 NP_038530 R.norvegicus Ctbp1 29382   NP_062074 100
H.sapiens CTBP1 1487 Gene Info NP_001319 99
C.elegans ctbp-1 180853   NP_508983 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta