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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bsg, basigin
Sequence ID:NM_001077184
NM_009768
Entrez Gene ID:12215
Ensembl ID:ENSMUSG00000023175

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10 42.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 79704505 - 79711968

 Exon Info From UCSC:
NM_001077184
NM_009768

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3589236Full LengthBC010270basigin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033898  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077184 NP_001070652    
NM_009768 NP_033898 P18572 ig

Related Sequences

 
mRNAGenPeptSwissProt
S63813 AAB27567 P18572
BC010270 AAH10270 P18572
AY089967 AAM09957 P18572
D00611 BAA00486 P18572
AK002332 BAB22018 P18572
Y16256 CAA76140 P18572
Y16257 CAA76141 O55107
Y16258 CAA76142 O55108

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bsg NP_033898 R.norvegicus Bsg 25246   NP_001103352 88
H.sapiens BSG 682 Gene Info NP_001719 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)