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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc4a1, solute carrier family 4 (anion exchanger), member 1
Sequence ID:NM_011403
Entrez Gene ID:20533
Ensembl ID:ENSMUSG00000006574

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 62.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 102349203 - 102365176

 Exon Info From UCSC:
NM_011403

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5702599Full LengthBC052419solute carrier family 4 (anion exchanger), member 1
6506270Full LengthBC053429solute carrier family 4 (anion exchanger), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035533  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011403 NP_035533 Q53ZN9
P04919
HCO3_cotransp
Band_3_cyto

Related Sequences

 
mRNAGenPeptSwissProt
M29379 AAA37187 Q53ZN9
P04919
BC052419 AAH52419 Q53ZN9
P04919
BC053429 AAH53429 Q53ZN9
P04919
AY296129 AAP51174 Q53ZN9
P04919
AK137542 BAE23401 Q53ZN9
P04919
AK157181 BAE33990 Q3U065
AK157833 BAE34217 Q3TZJ1
AK157861 BAE34239 Q3TZG9
AK158143 BAE34381 Q3TZ29
AK158184 BAE34398 Q3TZ12
AK158243 BAE34420 Q53ZN9
P04919
AK158453 BAE34515 Q53ZN9
P04919
AK162616 BAE36992 Q53ZN9
P04919
AK165195 BAE38072 Q3TNL6
AK165267 BAE38112 Q3TNH7
AK171808 BAE42674 Q3TAJ4
AK172316 BAE42941 Q53ZN9
P04919
AK172395 BAE42983 Q53ZN9
P04919
AK172569 BAE43071 Q53ZN9
P04919
X02677 CAA26506 Q53ZN9
P04919
X03917 CAA27555 P04919

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc4a1 NP_035533 R.norvegicus Slc4a1 24779   NP_036783 93
H.sapiens SLC4A1 6521 Gene Info NP_000333 83
A.thaliana BOR5 843820   NP_177619 31
A.thaliana BOR4 838116   NP_172999 31
N.crassa NCU01480 3872905   XP_956757 29
S.pombe SPBC543.05c 2540261   NP_596793 27
S.cerevisiae BOR1 855446   NP_014124 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)