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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hnf1b, HNF1 homeobox B
Sequence ID:NM_009330
Entrez Gene ID:21410
Ensembl ID:ENSMUSG00000020679

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11 44.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 83851048 - 83905007

NM_009330 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
25258366437083664893
5267258366940583669604
7269908367521783675481
99112268367744483677679
122713878369615483696314
138815238370255083702685
152417188370688383707077
171918378370972383709841
183827428371841283719316

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5044299Full LengthBC025189HNF1 homeobox B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033356  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009330 NP_033356 P27889 HNF-1B_C
HNF-1_N

Related Sequences

 
mRNAGenPeptSwissProt
BC025189 AAH25189 P27889
AB008174 BAA77718 P27889
Q5SS49
AB008175 BAA77719 P27889
Q5SS48
AB008176 BAA77720 P27889
AB008177 BAA77721 P27889
AK004837 BAB23604 P27889
Q5SS49
AK019258 BAB31632 P27889
AB052659 BAB60814 P27889
Q5SS49
X55842 CAA39358 P27889

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hnf1b NP_033356 R.norvegicus Hnf1b 25640   NP_037235 99
H.sapiens HNF1B 6928 Gene Info NP_000449 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)