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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cpsf2, cleavage and polyadenylation specific factor 2
Sequence ID:NM_016856
Entrez Gene ID:51786
Ensembl ID:ENSMUSG00000041781

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12|12 F1

Chromosomal Position (from UCSC)

Chromosomal Position:12: 101975987 - 102003610

 Exon Info From UCSC:
NM_016856

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3497854Full LengthBC013628cleavage and polyadenylation specific factor 2
3489033IncompleteBC007163cleavage and polyadenylation specific factor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058552  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016856 NP_058552 O35218 Lactamase_B
RMMBL

Related Sequences

 
mRNAGenPeptSwissProt
AF012822 AAB66830 O35218
BC007163 AAH07163 O35218
BC013628 AAH13628 O35218
AK054372 BAC35756 Q8C6K6
AK140869 BAE24504 Q3US33
AK141325 BAE24650 Q3URN8
AK147746 BAE28111 Q3UGU6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cpsf2 NP_058552 R.norvegicus Cpsf2 299256   NP_001100223 99
H.sapiens CPSF2 53981 Gene Info NP_059133 98
A.gambiae AgaP_AGAP002474 1273485   XP_312464 58
D.melanogaster Cpsf100 43426   NP_651658 58
C.elegans cpsf-2 179103   NP_504822 46
A.thaliana CPSF100 832453   NP_197776 42
S.pombe cft2 2539954   NP_595448 35
N.crassa NCU06869 3874225   XP_958078 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)