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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pcna, proliferating cell nuclear antigen
Sequence ID:NM_011045
Entrez Gene ID:18538
Ensembl ID:ENSMUSG00000027342

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F2|2 75.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 132249491 - 132253180

NM_011045 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1410132075021132075430
411534132075509132075632
535729132076979132077173
730797132077426132077493
798895132077638132077735
8961260132078551132078915

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3602797Full LengthBC005778proliferating cell nuclear antigen
3602977Full LengthBC010343proliferating cell nuclear antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035175  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011045 NP_035175 Q542J9
P17918
PCNA_N
PCNA_C

Related Sequences

 
mRNAGenPeptSwissProt
BC005778 AAH05778 Q542J9
P17918
BC010343 AAH10343 Q542J9
P17918
AK012614 BAB28355 Q91ZH2
AK012730 BAB28436 Q9CZD6
AK012932 BAB28557 Q542J9
P17918
AK088256 BAC40240 Q542J9
P17918
AK151238 BAE30230 Q542J9
P17918
AK151411 BAE30376 Q542J9
P17918
AK165217 BAE38082 Q542J9
P17918
AK168233 BAE40183 Q542J9
P17918
AK168596 BAE40463 Q542J9
P17918
X53068 CAA37243 P17918

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pcna NP_035175 R.norvegicus Pcna 25737   NP_071776 98
H.sapiens PCNA 5111 Gene Info NP_002583 97
D.melanogaster mus209 37290   NP_476905 70
A.gambiae AgaP_AGAP010220 1279643   XP_319407 69
A.thaliana PCNA2 817506   NP_180517 65
A.thaliana PCNA1 837249   NP_172217 64
N.crassa NCU09239 3880823   XP_964674 54
S.pombe pcn1 2540020   NP_596504 53
S.cerevisiae POL30 852385   NP_009645 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta