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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rabep1, rabaptin, RAB GTPase binding effector protein 1
Sequence ID:NM_019400
Entrez Gene ID:54189
Ensembl ID:ENSMUSG00000020817

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B3-B4|11 42.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 70844924 - 70940940

 Exon Info From UCSC:
NM_019400

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40109688Full LengthBC129853rabaptin, RAB GTPase binding effector protein 1
40109689Full LengthBC129854rabaptin, RAB GTPase binding effector protein 1
3485175IncompleteBC003921rabaptin, RAB GTPase binding effector protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062273  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019400 NP_062273 O35551 Rabaptin

Related Sequences

 
mRNAGenPeptSwissProt
AF248489 AAF78238 O35551
AF248490 AAG44544 O35551
BC003921 AAH03921 O35551
BC060166 AAH60166 O35551
BC129853 AAI29854 O35551
BC129854 AAI29855 O35551
D86066 BAA21783 O35551
AB001750 BAA23818 O35551
AK019413 BAB31710 O35551
AK151901 BAE30784 Q3U983
AK163126 BAE37204 Q3TR27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rabep1 NP_062273 R.norvegicus Rabep1 54190   NP_061997 99
H.sapiens RABEP1 9135 Gene Info NP_004694 96
A.gambiae AgaP_AGAP000407 1271838   XP_310692 31
C.elegans rabn-5 175823   NP_498266 31
D.melanogaster CG4030 37395   NP_611545 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)