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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ptf1a, pancreas specific transcription factor, 1a
Sequence ID:NM_018809
Entrez Gene ID:19213
Ensembl ID:ENSMUSG00000026735

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 A2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 19445662 - 19447492

NM_018809 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19731936728919368261
97415061936859319369125

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861527Full LengthBC138507pancreas specific transcription factor, 1a
40130782Full LengthBC132505pancreas specific transcription factor, 1a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061279  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018809 NP_061279 Q9QX98 HLH

Related Sequences

 
mRNAGenPeptSwissProt
BC132505 AAI32506 A2ATA7
BC138507 AAI38508 A2ATA7
AB035675 BAA88249 Q9QX98
AK007922 BAE43208 Q9QX98

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptf1a NP_061279 R.norvegicus Ptf1a 117034   NP_446416 96
H.sapiens PTF1A 256297 Gene Info NP_835455 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)