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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kpna1, karyopherin (importin) alpha 1
Sequence ID:NM_008465
Entrez Gene ID:16646
Ensembl ID:ENSMUSG00000022905

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B4-B5|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 35983362 - 36036162

 Exon Info From UCSC:
NM_008465

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3588534Full LengthBC006771karyopherin (importin) alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032491  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008465 NP_032491 Q60960 Arm
IBB

Related Sequences

 
mRNAGenPeptSwissProt
U34228 AAC52450 Q60960
BC006771 AAH06771 Q60960
AK028259 BAC25847 Q60960
AK028307 BAC25872 Q60960
AK154800 BAE32838 Q60960
AK169311 BAE41066 Q60960
AK169348 BAE41098 Q60960

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kpna1 NP_032491 R.norvegicus Kpna1 288064   NP_942021 99
H.sapiens KPNA1 3836 Gene Info NP_002255 98
A.thaliana MOS6 827472   NP_192124 56
A.thaliana IMPA-6 839517   NP_973743 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)