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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Batf3, Basic leucine zipper transcription factor, ATF-like 3
Sequence ID:NM_030060
Entrez Gene ID:381319
Ensembl ID:ENSMUSG00000026630

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H6|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 191098413 - 191108943

NM_030060 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1114192922292192922405
115219192924606192924710
220712192932329192932821

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126402Full LengthBC117083basic leucine zipper transcription factor, ATF-like 3
40126404Full LengthBC117085basic leucine zipper transcription factor, ATF-like 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084336  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030060 NP_084336 Q9D275 bZIP_2

Related Sequences

 
mRNAGenPeptSwissProt
BC117083 AAI17084 Q9D275
BC117085 AAI17086 Q9D275
AK020278 BAB32053 Q9D275

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Batf3 NP_084336 R.norvegicus Batf3 60462   NP_068637 92
H.sapiens BATF3 55509 Gene Info NP_061134 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)