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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Actc1, actin, alpha, cardiac muscle 1
Sequence ID:NM_009608
Entrez Gene ID:11464
Ensembl ID:ENSMUSG00000068614

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E4|2 64.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 114047288 - 114052811

NM_009608 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1321113873024113873344
322503113873858113874039
504695113874904113875095
696857113875250113875411
8581182113876024113876348
11831340113877638113877795
13411390113878497113878546

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6516862Full LengthBC062138actin, alpha, cardiac muscle 1
6759093Full LengthBC100600actin, alpha, cardiac muscle 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033738  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009608 NP_033738 P68033
Q497E4
Actin

Related Sequences

 
mRNAGenPeptSwissProt
M15501 AAA37167 P68033
BC062138 AAH62138 P68033
Q497E4
BC100600 AAI00601 P68033
Q497E4
AK014303 BAB29258 P68033
Q497E4
AK014307 BAB29260 Q9CXK3
AK146899 BAE27513 Q3UIJ3
AK168637 BAE40497 P68033
Q497E4
AK168661 BAE40515 P68033
Q497E4
AK168831 BAE40656 Q3TG92
AK169161 BAE40940 P68033
Q497E4
AK169165 BAE40944 P68033
Q497E4
X03767 CAA27398 Q61275

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Actc1 NP_033738 H.sapiens ACTC1 70 Gene Info NP_005150 100
R.norvegicus Actc1 29275   NP_062056 100
A.thaliana ACT7 830841   NP_196543 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)