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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Srsf3, serine/arginine-rich splicing factor 3
Sequence ID:NM_013663
Entrez Gene ID:20383
Ensembl ID:ENSMUSG00000071172

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17 11.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 29032672 - 29042896

NM_013663 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5710934Full LengthBC068111splicing factor, arginine/serine-rich 3 (SRp20)
6818630Full LengthBC083316splicing factor, arginine/serine-rich 3 (SRp20)
30441615Full LengthBC071196splicing factor, arginine/serine-rich 3 (SRp20)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038691  

Protein Infomation

NM_013663 NP_038691 P84104 RRM_1

Related Sequences

BC068111 AAH68111 P84104
BC071196 AAH71196 P84104
BC083316 AAH83316 P84104
AK009895 BAB26569 Q9D6W4
AK011657 BAB27762 P84104
AK078891 BAC37445 P84104
AK134177 BAE22040 P84104
AK135298 BAE22483 P84104
AK145089 BAE26230 P84104
AK145715 BAE26606 P84104
AK146010 BAE26830 P84104
AK146253 BAE27015 P84104
AK150912 BAE29950 P84104
AK152411 BAE31197 Q3U781
AK152779 BAE31490 Q3U781
AK153073 BAE31698 Q3U781
AK153209 BAE31808 P84104
X53824 CAA37821 P84104

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Srsf3 NP_038691 H.sapiens SRSF3 6428 Gene Info NP_003008 100
R.norvegicus Srsf3 361814   NP_001041372 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)