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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd5l, CD5 antigen-like
Sequence ID:NM_009690
Entrez Gene ID:11801
Ensembl ID:ENSMUSG00000015854

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 87357974 - 87371073

NM_009690 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11498716180287161950
1501858716479787164832
1865068716971187170031
5078458717146287171800
84611668717237087172690
116720378717412587174995

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3152586Full LengthBC006799CD5 antigen-like
4161650Full LengthBC094459CD5 antigen-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033820  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009690 NP_033820 Q9QWK4 SRCR

Related Sequences

 
mRNAGenPeptSwissProt
AF018268 AAB70571 Q9QWK4
AF018269 AAB70572 Q9QWK4
AF011428 AAD01445 Q9QWK4
BC006799 AAH06799 Q9QWK4
BC094459 AAH94459 Q9QWK4
AK159132 BAE34844 Q9QWK4
AK159181 BAE34880 Q9QWK4
AK159823 BAE35403 Q9QWK4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd5l NP_033820 R.norvegicus Cd5l 310693   NP_001020856 82
H.sapiens CD5L 922 Gene Info NP_005885 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)