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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit
Sequence ID:NM_016781
Entrez Gene ID:19082
Ensembl ID:ENSMUSG00000067713

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F1|15 53.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 98812796 - 98831480

 Exon Info From UCSC:
NM_016781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30551467Full LengthBC086660protein kinase, AMP-activated, gamma 1 non-catalytic subunit
40048832IncompleteBC109015protein kinase, AMP-activated, gamma 1 non-catalytic subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058061  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016781 NP_058061 O54950 CBS

Related Sequences

 
mRNAGenPeptSwissProt
AF036535 AAB95475 O54950
BC086660 AAH86660 Q3TWR3
O54950
BC109015 AAI09016 Q2VPC9
AK138324 BAE23624 Q3TWR3
O54950
AK159583 BAE35203 Q3TWR3
O54950

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prkag1 NP_058061 H.sapiens PRKAG1 5571 Gene Info NP_001193638 98
R.norvegicus Prkag1 25520   NP_037142 98
C.elegans Y111B2A.8 176677   NP_499637 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta