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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ivd, isovaleryl coenzyme A dehydrogenase
Sequence ID:NM_019826
Entrez Gene ID:56357
Ensembl ID:ENSMUSG00000027332

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E4-E5|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 118862020 - 118880586

 Exon Info From UCSC:
NM_019826

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4192286Full LengthBC018325isovaleryl coenzyme A dehydrogenase
4237982Full LengthBC027198isovaleryl coenzyme A dehydrogenase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062800  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019826 NP_062800 Q9JHI5 EC 1.3.8.4 Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF225989 AAF35888 Q9JHI5 EC 1.3.8.4
BC018325 AAH18325 Q9JHI5 EC 1.3.8.4
BC027198 AAH27198 Q9JHI5 EC 1.3.8.4
AK005024 BAB23751 Q9JHI5 EC 1.3.8.4
AK017660 BAB30859 Q9JHI5 EC 1.3.8.4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ivd NP_062800 R.norvegicus Ivd 24513   NP_036724 96
H.sapiens IVD 3712 Gene Info NP_002216 91
A.thaliana IVD 823668   NP_190116 70
C.elegans ivd-1 177281   NP_500720 68
D.melanogaster CG6638 38979   NP_648239 65
A.gambiae AgaP_AGAP006780 1270283   XP_308965 63
N.crassa NCU02126 3880448   XP_964284 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)