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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Carkd, carbohydrate kinase domain containing
Sequence ID:NM_001190357
NM_026995
Entrez Gene ID:69225
Ensembl ID:ENSMUSG00000031505

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 A2

Chromosomal Position (from UCSC)

Chromosomal Position:8: 11497590 - 11513284

 Exon Info From UCSC:
NM_001190357
NM_026995

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4211749Full LengthBC019538carbohydrate kinase domain containing
5148177Full LengthBC021955carbohydrate kinase domain containing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081271  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001190357 NP_001177286      
NM_026995 NP_081271 Q9CZ42 EC 4.2.1.93 Carb_kinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019538 AAH19538 Q9CZ42 EC 4.2.1.93
BC021955 AAH21955 Q9CZ42 EC 4.2.1.93
AK003048 BAB22531 Q9CZ42 EC 4.2.1.93
AK009254 BAB26172 Q9CZ42 EC 4.2.1.93
AK012456 BAB28251 Q9CZ42 EC 4.2.1.93
AK013028 BAB28607 Q9CZ42 EC 4.2.1.93
AK013069 BAB28632 Q9CZ42 EC 4.2.1.93
AK013420 BAB28847 Q9CZ42 EC 4.2.1.93
AK154142 BAE32403 Q9CZ42 EC 4.2.1.93
AK171034 BAE42200 Q9CZ42 EC 4.2.1.93

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Carkd NP_081271 R.norvegicus Carkd 361185   NP_001101872 93
H.sapiens CARKD 55739 Gene Info NP_001229810 80
A.gambiae AgaP_AGAP011983 1280688   XP_320550 53
A.thaliana AT5G19150 832035   NP_974811 50
D.melanogaster CG10424 40085   NP_649090 48
S.cerevisiae YKL151C 853706   NP_012771 47
S.pombe SPCC61.03 2539500   NP_588194 47
N.crassa NCU02513 3881794   XP_965644 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)