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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tpm2, tropomyosin 2, beta
Sequence ID:NM_009416
Entrez Gene ID:22004
Ensembl ID:ENSMUSG00000028464

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 B1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 43515682 - 43523464

NM_009416 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112924352758343528874
129313624353110143531170
136314254353127343531335
142615014353151543531590
150215724353209843532168
157316904353226043532377
169118244353248243532615
182519504353554643535671
195120984353611243536259

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3497670Full LengthBC014809tropomyosin 2, beta
4990394Full LengthBC024358tropomyosin 2, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033442  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009416 NP_033442 P58774 Tropomyosin

Related Sequences

 
mRNAGenPeptSwissProt
M87635 AAA37288 Q61344
M81086 AAA40484 P58774
BC014809 AAH14809 Q91VH3
BC024358 AAH24358 Q6PJ18
AK003186 BAB22629 Q9D1R6
X12650 CAA31181 P58774
X58381 CAA41271 P58774

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tpm2 NP_033442 H.sapiens TPM2 7169 Gene Info NP_998839 87
R.norvegicus Tpm2 500450   NP_001019516 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)