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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pkd2, polycystic kidney disease 2
Sequence ID:NM_008861
Entrez Gene ID:18764
Ensembl ID:ENSMUSG00000034462

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E5|5 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 104459553 - 104505816

 Exon Info From UCSC:
NM_008861

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6409512IncompleteBC053058polycystic kidney disease 2
6409512IncompleteBC062969polycystic kidney disease 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032887  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008861 NP_032887 O35245 PKD_channel

Related Sequences

 
mRNAGenPeptSwissProt
AF014010 AAC53388 O35245
FJ609779 ACN11624 O35245
AK053502 BAC35407 O35245
Y13278 CAA73727 O35245
Y14120 CAA74552 O35245

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pkd2 NP_032887 R.norvegicus Pkd2 498328   XP_573552 97
H.sapiens PKD2 5311 Gene Info NP_000288 91
C.elegans pkd-2 178424   NP_502838 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)