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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cxcl15, chemokine (C-X-C motif) ligand 15
Sequence ID:NM_011339
Entrez Gene ID:20309
Ensembl ID:ENSMUSG00000029375

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5 51.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 90794570 - 90801885

NM_011339 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1959122355991223653
962259122422491224353
2263099122696891227051
31021279123027591232092

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30298837Full LengthBC061138chemokine (C-X-C motif) ligand 15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035469  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011339 NP_035469 Q9WVL7
Q3UQ15
IL8

Related Sequences

 
mRNAGenPeptSwissProt
AF082859 AAD38079 Q9WVL7
Q3UQ15
BC061138 AAH61138 Q9WVL7
Q3UQ15
AK142955 BAE25229 Q9WVL7
Q3UQ15

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)